Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015815679.1_cds_XP_016498431.1_12462
CDS Infomation

[gene=LOC107817169] [db_xref=GeneID:107817169] [protein=pentatricopeptide repeat-containing protein At2g37320-like] [protein_id=XP_016498431.1] [location=complement(48835..50301)] [gbkey=CDS]
Sequence

ATGAGCCATCTCCTTTTTCGTCATGGTATGAGTAAAAAATTGTCACTTGCCTTACAGACG
GTTACCAAAACCAAGAGCCCATTCAAGGGCCAGAAATTCCTTGATATCATAGCTCCAAAG
CCAAATGTAACCAAGAATCACCAAAACTATCTTAACCTCATTGAGGACTTTCTTCAAACA
GATTCTGAACAAAATTGTACAAAACACGCATTGCATAAAGAACTGTCTTTTCCATATTCA
ATGGAAGATTCAATCTCATTGCTTTTTAAGTTTCATAAAGAAGGGTCTAAAATTGGGGTG
AGTTTAGTGTCAAATGCTATGGGTTTATGTGCGTCGAAGAGAGATTTTAGGGTAGGGATT
CAAGTTCATTGCTTGGTGATTGTAAATGGGTTTTTGTCCAATGTTTATGTTGGTAGTTCT
TTGATCACCTTTTATAGTAATTTTGGAGGAGTGGTGGATGCTTACCAAATGTTTGACGAA
ATGCCTGTGAGAAATGTTGTGTCTTGGAGTGCTATAATAAATGGTTTTGCACAAGAGAAT
GAGGTTGATATGTGCTTGAAATTGTATAAGGGTATGATGGGCTTGACATTGAAACCTAAT
GAGTTCACGTTTACGAGCTTGCTGAGTTCGTGTATGGGTAGTGGGTGTTTTGGTCATGGC
AGGAGTATTCACTGCCAAATAATTCATTTGGGTTTTGATTCCTATATACACGTTTTGAAT
GCCCTTTTATCAATGTATTGTAAGTGCGGGGAAGTAAAGGATGCTTTTCACATTTTTGAA
AATATGAAGAGAAAAGATTTGGTATCATGGAACTCGATGATTTGTGGTTATGGACAGCAA
GGACATGCAATTCAAGCTATTGAACTTTTTGAGGAAATGAAGAAACAAAAAGTGAGACCT
GATTCCATTACTTTCCTTGGGGTGTTATCTTCTTGCCGCCATGCAGGTTCTGTTAAAGAA
GGCATGTTTTACTTTAATTCAATGGTTGATTACCATGTGAAGCCAGAGCTGAATCATTAT
TCATGTATTATAGACCTTCTCGGACGAGCACGGTTACTAGAAGAGGCTCGGGAGTTTATC
AAGAAGATGCCAATCCAACCAAATGGTGTCATCTGGGGTTCATTGCTTTTGTCATGCAGG
CTTCACGGGAATTTTTGGTTGGGCATCGAGGCTGCAGAAAATAGGCTTGCGCTAGAACCA
TGGTCCACCTCTACCCACTTGCAACTGTTAAATTTATACGCTAGTTTAGGATACTGGGAT
CAGGCAGCGAGAGTGCAGAAGCTGATGAAAGACAATGGACTTAAAAGGGATCCTGGTTAT
AGTTGGATTGAGATAAACAGTCAAGTTTTTCGCTTTACTGCTGAAGACATATCAATGGGA
CATATTAAATCAATTGGTAGTTTGGTGGATATTTTGGTGGATCACATGAGAAGCTTTGGT
GTAGAAGAAACTTATTCCACTGAATAG

Peptide Sequence

PEP ID

XP_016498431.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At2g37320-like [Nicotiana tabacum]
Sequence

MSHLLFRHGMSKKLSLALQTVTKTKSPFKGQKFLDIIAPKPNVTKNHQNYLNLIEDFLQT
DSEQNCTKHALHKELSFPYSMEDSISLLFKFHKEGSKIGVSLVSNAMGLCASKRDFRVGI
QVHCLVIVNGFLSNVYVGSSLITFYSNFGGVVDAYQMFDEMPVRNVVSWSAIINGFAQEN
EVDMCLKLYKGMMGLTLKPNEFTFTSLLSSCMGSGCFGHGRSIHCQIIHLGFDSYIHVLN
ALLSMYCKCGEVKDAFHIFENMKRKDLVSWNSMICGYGQQGHAIQAIELFEEMKKQKVRP
DSITFLGVLSSCRHAGSVKEGMFYFNSMVDYHVKPELNHYSCIIDLLGRARLLEEAREFI
KKMPIQPNGVIWGSLLLSCRLHGNFWLGIEAAENRLALEPWSTSTHLQLLNLYASLGYWD
QAARVQKLMKDNGLKRDPGYSWIEINSQVFRFTAEDISMGHIKSIGSLVDILVDHMRSFG
VEETYSTE

Transcript Sequence

Gene sequence data has not been registered.